Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs7743263 chr6:54531919 A/G 1.42E-7 286 25.63 26.3 12.03 KM Plot
KIRP rs77438349 chr12:49841424 A/G 3.95E-6 287 25.57 39.53 10.97 KM Plot
KIRP rs77494556 chr4:41775415 G/A 2.11E-6 288 25.67 26.37 15.7 KM Plot
KIRP rs77505800 chr11:86160165 T/G 0.000129 287 26.4 19.97 9.85 KM Plot
KIRP rs77507461 chr1:58990954 A/G 2.29E-5 289 25.6 27.43 13.17 KM Plot
KIRP rs77521854 chr16:90047402 A/G 3.59E-5 278 25.58 39.53 10.23 KM Plot
KIRP rs77522907 chr16:90024447 T/C 1.97E-8 282 24.73 34.82 5.95 KM Plot
KIRP rs7759537 chr6:27846129 C/T 2.94E-8 287 25.93 25.2 13.07 KM Plot
KIRP rs77632445 chr16:90083021 G/A 1.34E-7 284 24.73 34.67 10.7 KM Plot
KIRP rs77646997 chr16:89731905 G/C 3.2E-8 281 26.38 25.6 9.77 KM Plot
KIRP rs77654484 chr11:47206594 C/A 4.98E-6 288 25.57 29.8 12.63 KM Plot
KIRP rs77663125 chr7:20702294 T/C 6.74E-6 288 25.93 23.1 11.2 KM Plot
KIRP rs77707831 chr7:20690776 A/G 2.29E-5 288 25.82 22.57 11.2 KM Plot
KIRP rs77726188 chr7:20676984 C/G 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs7775052 chr6:26197807 C/T 6.74E-5 289 26.28 24.8 19.83 KM Plot